BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E02LP1|AL426217
(790 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1668 1550 0.0
>3x_Contig1668
Length = 13429
Score = 1550 bits (780), Expect = 0.0
Identities = 786/790 (99%)
Strand = Plus / Plus
Query: 1 gatctcaaaaaagtacatagaagaatcgcaagttgttgtacaagaccttgtcgaaaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1913 gatctcaaaaaagtacatagaagaatcgcaagttgttgtacaagaccttgtcgaaaacac 1972
Query: 61 attggataagctggatttcaaattccagaaacttgatcagctagaaaaatccatgaaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1973 attggataagctggatttcaaattccagaaacttgatcagctagaaaaatccatgaaggc 2032
Query: 121 tgaaagagaaatttatctcaaggagacagagaggttggtaaatgaaagattaaagctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2033 tgaaagagaaatttatctcaaggagacagagaggttggtaaatgaaagattaaagctgac 2092
Query: 181 caaacaaataaaagacataaactcgcacttagctgaactacagatcactaagagaattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2093 caaacaaataaaagacataaactcgcacttagctgaactacagatcactaagagaattgt 2152
Query: 241 attatcatcagaccagaagagtgaaactgatatctccctaatggagaaagcagatgtcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 attatcatcagaccagaagagtgaaactgatatctccctaatggagaaagcagatgtcga 2212
Query: 301 aggtgagaccgagttaaagaagaatgatgaaatcgacattcaaagtatttctaaatctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2213 aggtgagaccgagttaaagaagaatgatgaaatcgacattcaaagtatttctaaatctga 2272
Query: 361 acctcagttatataccaaatggtccctataaaactaaataaagtgtataattwatgtata 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2273 acctcagttatataccaaatggtccctataaaactaaataaagtgtataattaatgtata 2332
Query: 421 ccttgaagcttatttcatgggtatgttacttagttcgaatgctacgtacgatgcctcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2333 ccttgaagcttatttcatgggtatgttacttagttcgaatgctacgtacgatgcctcctt 2392
Query: 481 ttggatggctttgggtatttcttttggttattgcaccttctctttttataagtccatatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2393 ttggatggctttgggtatttcttttggttattgcaccttctctttttataagtccatatt 2452
Query: 541 twaggttaaaatggatcttaaaaaacaatggatcagaacttactttgttatgcttagcca 600
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2453 taaggttaaaatggatcttaaaaaacaatggatcagaacttactttgttatgcttagcca 2512
Query: 601 aaagtcaaaagtcagttgtggttcatgacaacaccaatctatcaacatgtcattacctga 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2513 aaagtcaaaagtcagtagtggttcatgacaacaccaatctatcaacatgtcattacctga 2572
Query: 661 attaccgcctaggccagatcgtccaaagtctaccgaatcactccattgctccgatgttga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2573 attaccgcctaggccagatcgtccaaagtctaccgaatcactccattgctccgatgttga 2632
Query: 721 gctacctcaaaatgtggatcttttgacctttaacgacattcaacagttacttcagcmaca 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2633 gctacctcaaaatgtggatcttttgacctttaacgacattcaacagttacttcagcaaca 2692
Query: 781 ggatatgcct 790
||||||||||
Sbjct: 2693 ggatatgcct 2702
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6037
Number of Sequences: 1807
Number of extensions: 6037
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 790
length of database: 10,358,551
effective HSP length: 16
effective length of query: 774
effective length of database: 10,329,639
effective search space: 7995140586
effective search space used: 7995140586
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)